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Scientists closing in on why some people never get COVID. That could help with future vaccines

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A new study identified a specific gene in people who didn’t get infected

Early on in the pandemic, in 2021, Hugh Potter ate dinner and watched TV next to his wife while she coughed violently from COVID-19, yet he never even sniffled.

It’s been thought that some people may not have gotten COVID because they were careful to avoid exposure. Alternatively, some people may have been infected but showed no symptoms. Another possibility is that some people have a genetic advantage that makes them a super-dodger.

Bloody lucky, Potter, 68, said. Where I work, I think almost everyone has had it. A few didn’t believe the Pickering, Ont., resident has escaped it since the early years of the pandemic.

Now, experts peering into the genes of such rare people have gained some surprising insights.

Last week, scientists writing in the journal Nature (new window) described high activity of a specific gene in people who didn’t get infected. And in a complementary research project, Potter provided DNA from saliva samples to researchers at McGill University Health Centre looking for those with a golden armour against the virus.

Researchers hope by better understanding early immune responses, it could help with developing nasal spray forms of vaccines for the coronavirus, similar to the existing FluMist to prevent influenza.

As much as people may wish to forget the pandemic emergency, the virus is still with us (new window) and kills about 20 people a week in Canada. The World Health Organization (new window) reported more than 2,600 new fatalities in April, bringing total confirmed cases to over 775 million including more than seven million deaths globally.

Voluntary infection

To gain some leads into what makes people super-dodgers, in March 2021, investigators with the UK COVID-19 Human Challenge study administered a low dose of the original form of SARS-CoV-2 through the nose to 36 healthy adult volunteers and then closely tracked how long it took their immune cells to kick into gear. None were previously exposed to the virus or vaccinated.

The 16 participants with detailed monitoring of their blood and nose fell into three groups:

  • Six developed a sustained infection and fell ill.
  • Three became infected but quickly cleared the virus.
  • Seven never tested positive on the gold standard PCR test, which shows they successfully prevented infection.

Christopher Chiu, a professor of infectious diseases at Imperial College London, and his co-authors saw high levels of activity in a gene called HLA-DQA2. They think the gene helps flag invaders to the immune system so it can quickly destroy the virus.

For medical researchers, the study offers a step-by-step look at what happens in the immune responses to the virus in both the nose and blood and their interaction.

Location, location, location

Immunologists who weren’t involved in the U.K. study say they’re not sure why or how that specific gene offers protection.

If you had asked me to bet money on the genes involved in the protection, they’re not the ones I would have chosen, said professor Dawn Bowdish, who holds the Canada Research Chair in Aging and Immunity at McMaster University in Hamilton.

The realtor’s motto of location, location, location applies, Bowdish said, because our nose, blood and lungs all differ in the type and timing of immune responses.

For instance, the vaccines we get in the arm are designed to trigger our immune system to mount a response as part of adaptive immunity.

HLA genes take up the trigger and present it to fighter cells of the immune system.

While the particular HLA in the study was better at blocking infection in COVID, it isn’t necessarily better overall since it is also associated with some diseases like lupus and rheumatoid arthritis, said Dr. Lynora Saxinger, an infectious diseases specialist at the University of Alberta.

In people who got a sustained infection in the study, it took their immune systems a while to concentrate efforts in the nasal mucosa lining areas like the nose, Saxinger said. In contrast, findings from those who mounted the fastest immune response could invigorate the field of nasal vaccines.

Blocking infection

Teams of researchers at McMaster (new window) and the University of Ottawa (new window) are among those aiming to design nasal spray or puffer forms of inhaled vaccines to not only prevent the risk of severe illness requiring hospitalization and death from COVID — as current vaccines do — but to block infection altogether.

Bowdish said scientists used to think turning on immune cells in the nose would be enough to kill the virus. But in the new study from England, cells involved in recruiting immune reactions in the mouth, nose and lungs were all important.

We are hoping to move to a world where we use inhaled vaccines or nasal vaccines, and this gives us some hints about what specific … immune genes we want those vaccines to turn on to help protect us, Bowdish said.

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Saxinger called the opportunity to block infection really big, adding understanding how to clear the virus early is also important to prevent asymptomatic spread.

The pandemic landscape of variants and immunity from vaccinations is now very different than when the volunteers were exposed in the study. Some people come down with COVID repeatedly as variants evolve to dodge immune defences. And COVID illness continues to push some older, vulnerable individuals over the edge when hospitalized, doctors say.

Next, the British researchers plan to test the potential of several nasal spray vaccines against the family of coronaviruses that includes SARS-CoV-2, MERS and four seasonal common cold viruses in other human challenge trials (new window).

There might be some kind of common features that that would allow you to consider preventative or very early treatment, Saxinger said.

 

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Whooping cough is at a decade-high level in US

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MILWAUKEE (AP) — Whooping cough is at its highest level in a decade for this time of year, U.S. health officials reported Thursday.

There have been 18,506 cases of whooping cough reported so far, the Centers for Disease Control and Prevention said. That’s the most at this point in the year since 2014, when cases topped 21,800.

The increase is not unexpected — whooping cough peaks every three to five years, health experts said. And the numbers indicate a return to levels before the coronavirus pandemic, when whooping cough and other contagious illnesses plummeted.

Still, the tally has some state health officials concerned, including those in Wisconsin, where there have been about 1,000 cases so far this year, compared to a total of 51 last year.

Nationwide, CDC has reported that kindergarten vaccination rates dipped last year and vaccine exemptions are at an all-time high. Thursday, it released state figures, showing that about 86% of kindergartners in Wisconsin got the whooping cough vaccine, compared to more than 92% nationally.

Whooping cough, also called pertussis, usually starts out like a cold, with a runny nose and other common symptoms, before turning into a prolonged cough. It is treated with antibiotics. Whooping cough used to be very common until a vaccine was introduced in the 1950s, which is now part of routine childhood vaccinations. It is in a shot along with tetanus and diphtheria vaccines. The combo shot is recommended for adults every 10 years.

“They used to call it the 100-day cough because it literally lasts for 100 days,” said Joyce Knestrick, a family nurse practitioner in Wheeling, West Virginia.

Whooping cough is usually seen mostly in infants and young children, who can develop serious complications. That’s why the vaccine is recommended during pregnancy, to pass along protection to the newborn, and for those who spend a lot of time with infants.

But public health workers say outbreaks this year are hitting older kids and teens. In Pennsylvania, most outbreaks have been in middle school, high school and college settings, an official said. Nearly all the cases in Douglas County, Nebraska, are schoolkids and teens, said Justin Frederick, deputy director of the health department.

That includes his own teenage daughter.

“It’s a horrible disease. She still wakes up — after being treated with her antibiotics — in a panic because she’s coughing so much she can’t breathe,” he said.

It’s important to get tested and treated with antibiotics early, said Dr. Kris Bryant, who specializes in pediatric infectious diseases at Norton Children’s in Louisville, Kentucky. People exposed to the bacteria can also take antibiotics to stop the spread.

“Pertussis is worth preventing,” Bryant said. “The good news is that we have safe and effective vaccines.”

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AP data journalist Kasturi Pananjady contributed to this report.

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The Associated Press Health and Science Department receives support from the Robert Wood Johnson Foundation. The AP is solely responsible for all content.

The Canadian Press. All rights reserved.

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Scientists show how sperm and egg come together like a key in a lock

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How a sperm and egg fuse together has long been a mystery.

New research by scientists in Austria provides tantalizing clues, showing fertilization works like a lock and key across the animal kingdom, from fish to people.

“We discovered this mechanism that’s really fundamental across all vertebrates as far as we can tell,” said co-author Andrea Pauli at the Research Institute of Molecular Pathology in Vienna.

The team found that three proteins on the sperm join to form a sort of key that unlocks the egg, allowing the sperm to attach. Their findings, drawn from studies in zebrafish, mice, and human cells, show how this process has persisted over millions of years of evolution. Results were published Thursday in the journal Cell.

Scientists had previously known about two proteins, one on the surface of the sperm and another on the egg’s membrane. Working with international collaborators, Pauli’s lab used Google DeepMind’s artificial intelligence tool AlphaFold — whose developers were awarded a Nobel Prize earlier this month — to help them identify a new protein that allows the first molecular connection between sperm and egg. They also demonstrated how it functions in living things.

It wasn’t previously known how the proteins “worked together as a team in order to allow sperm and egg to recognize each other,” Pauli said.

Scientists still don’t know how the sperm actually gets inside the egg after it attaches and hope to delve into that next.

Eventually, Pauli said, such work could help other scientists understand infertility better or develop new birth control methods.

The work provides targets for the development of male contraceptives in particular, said David Greenstein, a genetics and cell biology expert at the University of Minnesota who was not involved in the study.

The latest study “also underscores the importance of this year’s Nobel Prize in chemistry,” he said in an email.

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The Associated Press Health and Science Department receives support from the Howard Hughes Medical Institute’s Science and Educational Media Group. The AP is solely responsible for all content.

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