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Canada is on the hunt for coronavirus variants — but may not be able to keep up with outbreaks – CBC.ca

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This is an excerpt from Second Opinion, a weekly roundup of health and medical science news emailed to subscribers every Saturday morning. If you haven’t subscribed yet, you can do that by clicking here.


Canada is on the hunt for highly contagious strains of the coronavirus, but experts say they could already be spreading across the country and we may not be able to keep up with surveillance as more outbreaks occur.

Only five per cent of virus samples in Canada are tested for coronavirus variants, including those first identified in South Africa, Brazil and the U.K. — with the latter estimated to be at least 56 per cent more transmissible than the main coronavirus and potentially more deadly as well.

There have been at least 34 cases of variants confirmed in Canada in recent weeks, but several have no known link to travel and have prompted concerns the variants could be already driving outbreaks undetected.

“To ensure that virus variants that can spread more easily do not take hold, there is even greater urgency to suppress COVID-19 activity in Canada,” Chief Public Health Officer Dr. Theresa Tam said Wednesday.

First variant outbreak in Canada a ‘wake-up call’

Canada’s first outbreak due to a coronavirus variant was identified this week at the Roberta Place long-term care home in Barrie, Ont., where at least 81 staff and almost all 130 residents have been infected with COVID-19 since the outbreak was declared on Jan. 8, including 27 who have died.

Local public health officials suspected the outbreak was caused by the variant first identified in the U.K., also known as B117and sent samples to public health laboratories for further testing earlier this week.

Six preliminary samples have since tested positive for a variant, but it will take days to determine whether the outbreak was caused by B117 or a different strain. 

“Barrie has become ground zero for what is likely a [coronavirus] variant of concern, which has spread rapidly throughout Roberta Place and we are concerned that it will spread into our community and into other long-term and retirement homes,” said Dr. Charles Gardner, Simcoe Muskoka District Health Unit’s medical officer of health.

“This is a race against time and we need to use the COVID-19 vaccine as our most effective means to protect these residents. We have to do what we can to prevent other outbreaks.”

Local public health officials said Friday night they were accelerating the vaccine rollout in light of the outbreak and will begin vaccinating residents and staff at the long-term care home this weekend.

The Roberta Place long-term care home in Barrie, Ont., is facing Canada’s first outbreak where a coronavirus variant was detected. (Evan Mitsui/CBC)

Prof. Robyn Lee, a genomic epidemiologist at the University of Toronto’s Dalla Lana School of Public Health, said the situation at Roberta Place should be “another wake-up call that we really need to be doing something to stop transmission in the community and to test people to make sure that this doesn’t come into long-term care facilities.” 

Lee is awaiting the full results from the Public Health Ontario laboratory to see which variant specifically was spreading at Roberta Place, but says it’s likely we’ll see more outbreaks across Canada in the near future. 

“These variants appear to be more transmissible, which means we’re going to see more cases — especially if they do kind of kick off,” she said.

Lee says Canada needs to “very seriously crack down” with public health measures and speed up vaccination rollouts across the country in response to the threat posed by variants.

A visitor talks to a resident through a window of the Roberta Place long-term care home on Monday. (Evan Mitsui/CBC)

“What we’re seeing in Roberta Place is what happens when these get in and how aggressive they can be,” said Dr. Zain Chagla, an infectious diseases physician at St. Joseph’s Healthcare Hamilton and an associate professor at McMaster University.

“The whole concern about this variant is it getting into care facilities and places with vulnerable people — and it did exactly that.” 

Chagla said the Roberta Place outbreak has also raised concerns that variants could be the driving factor behind other recent COVID-19 outbreaks in Canada with unusually high numbers of cases in a short period of time. 

“There certainly is a worry that some of those were actually related to coronavirus variants,” he said.

“There’s probably a bigger burden out there.”

‘Detective work’ identifying variants is slow

Testing for the variants is done through a time-consuming process called genomic sequencing, which requires highly specialized staff and equipment and takes days to return results — precious time when variants could spread more widely. 

“We need to increase our surveillance of the virus in Canada,” said Art Poon, an associate professor in the department of pathology and laboratory medicine at Western University in London, Ont.

“We need the resources to do more sequencing so that we have better capability of tracking the spread of not only variants of concern, but other variants that may be arising in Canada.” 

Catalina Lopez-Correa, executive director of the Canadian COVID Genomics Network (CanCOGen), which was formed in April 2020 to track variants and co-ordinate viral genome sequencing across Canada, said that while the number of samples tested in Canada is low, the testing efforts are focused on very specific samples. 

“It’s not about the numbers, it’s about the strategy,” she said. “It’s about prioritizing the right samples and co-ordinating efforts.” 

Lopez-Correa said CanCOGen’s strategy for testing for variants in Canada includes targeting fast-spreading outbreaks; geographic regions with an unusually high growth in cases; younger patients with very severe disease; reinfections; and those infected after being vaccinated.

There are currently eight labs across Canada testing virus samples for the variants, including the National Microbiology Lab in Winnipeg and seven other provincial labs. 

“Some people are calling us genomic detectives and that’s exactly what we are,” said Lopez-Correa. “It’s detective work trying to figure out where those variants are and how to trace them.” 

But although scientists are working around the clock to test the samples, they can only move as fast as the results will allow — meaning scaling up surveillance in the face of faster spreading variants isn’t easy. 

WATCH | Coronavirus variant first detected in U.K. may have higher death risk: Boris Johnson

While saying the variant of the coronavirus first detected in the U.K. may be associated with a higher degree of mortality, British Prime Minister Boris Johnson said it’s also putting additional pressure on the nation’s health-care system. 1:42

“If you have a contained outbreak in a specific geographical region, you don’t need to sequence everybody that’s infected in that outbreak, because most of them will have the same variant of the virus,” Lopez-Correa said. “But, of course, it’s a challenge to increase the amount of samples we’re doing.” 

CanCOGen was created with initial federal funding of $40 million, half of which was allocated specifically for sequencing the virus, but Lopez-Correa said Canada could divert more money to staff and resources to test for the variants faster.

Lee said even with increased funding there is only a certain amount of surveillance Canada can reasonably do, given that the labs work on samples for all kinds of different viruses across the country. 

“Ideally, we would be sequencing more, and I know there are efforts to do this, but there are some limitations,” she said, including the time it takes to collect samples, transport them to specific labs, sequence them and analyze the results. 

“That involves a lot of different people and a lot of different resources. So, while it would be great to keep scaling up, there are going to be limits on what can be done.” 

Canada ‘way behind’ on sharing data on variants

The World Health Organization called on countries around the world to increase their capacity to test for variants earlier this month, but also underscored the need to share the data internationally. 

Poon said Canada is “way behind” in sharing data on variants around the world, partly because our public health system is understaffed and doesn’t currently have the resources to keep up with genomic surveillance.

“We are conservative about data sharing … I think that concerns about privacy have overridden calls to share data with other countries,” he said.

“Since this is a global pandemic, getting a clear picture of what’s going on requires open sharing of data between countries. But that’s not something that’s been happening with Canada.” 

Lopez-Correa said Canada could improve its capacity to share data across the country and internationally. She said data is first shared domestically before being sent overseas.

“We could do better, but we’re submitting the data,” she said. “If you look at regions like Africa, Latin America, they’re not generating that data. They don’t have the capacity.” 

Without effective international sharing of data, Canada could continue to see new variants arise in the future that are only identified after they’ve spread around the world. 

WATCH | Vaccinations a race against coronavirus variants: 

New coronavirus variants are increasing the pressure to get more people vaccinated before the variants derail those efforts and vaccines need to be retooled. 2:01

In the meantime, Lee said, the emergence of variants in Canada further underscores the need to vaccinate those most at risk of severe illness and death as soon as possible.

“Vaccination is going to play a critical role in this. We need to get everyone vaccinated who is in those long-term care facilities and all of the staff as well as their primary caregivers,” she said.

“I think that has to be the No. 1 priority at the moment.” 


To read the entire Second Opinion newsletter every Saturday morning, subscribe by clicking here.

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Alouettes receiver Philpot announces he’ll be out for the rest of season

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Montreal Alouettes wide receiver Tyson Philpot has announced he will be out for the rest of the CFL season.

The Delta, B.C., native posted the news on his Instagram page Thursday.

“To Be Continued. Shoutout my team, the fans of the CFL and the whole city of Montreal! I can’t wait to be back healthy and write this next chapter in 2025,” the statement read.

Philpot, 24, injured his foot in a 33-23 win over the Hamilton Tiger-Cats on Aug. 10 and was placed on the six-game injured list the next week.

The six-foot-one, 195-pound receiver had 58 receptions, 779 yards and five touchdowns in nine games for the league-leading Alouettes in his third season.

Philpot scored the game-winning touchdown in Montreal’s Grey Cup win last season to punctuate a six-reception, 63-yard performance.

This report by The Canadian Press was first published Sept. 12, 2024.

The Canadian Press. All rights reserved.



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Tua Tagovailoa sustains concussion after hitting head on turf in Dolphins’ loss to Bills

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MIAMI GARDENS, Fla. (AP) — Miami Dolphins quarterback Tua Tagovailoa sustained a concussion for the third time in his NFL career, leaving his team’s game Thursday night against Buffalo after running into defensive back Damar Hamlin and hitting the back of his head against the turf.

Tagovailoa remained down for about two minutes before getting to his feet and walking to the sideline after the play in the third quarter. He made his way to the tunnel not long afterward, looking into the stands before smiling and departing toward the locker room.

The Dolphins needed almost no time before announcing it was a concussion. The team said he had two during the 2022 season, and Tagovailoa was diagnosed with another concussion when he was a college player at Alabama.

Dolphins coach Mike McDaniel said Tagovailoa would get “proper procedural evaluation” and “appropriate care” on Friday.

“The furthest thing from my mind is, ‘What is the timeline?’ We just need to evaluate and just worry about my teammate, like the rest of the guys are,” McDaniel said. “We’ll get more information tomorrow and take it day by day from here.”

Some players saw Tagovailoa in the locker room after the game and said they were encouraged. Tagovailoa spoke with some players and then went home after the game, McDaniel said.

“I have a lot of love for Tua, built a great relationship with him,” said quarterback Skylar Thompson, who replaced Tagovailoa after the injury. “You care about the person more than the player and everybody in the organization would say the same thing. Just really praying for Tua and hopefully everything will come out all right.”

Tagovailoa signed a four-year, $212 million extension before this season — a deal that makes him one of the highest-paid players in the NFL — and was the NFL’s leading passer in Week 1 this season. Tagovailoa left with the Dolphins trailing 31-10, and that was the final score.

“If you know Tua outside of football, you can’t help but feel for him,” Bills quarterback Josh Allen said on Amazon following the game. “He’s a great football player but he’s an even greater human being. He’s one of the best humans on the planet. I’ve got a lot of love for him and I’m just praying for him and his family, hoping everything’s OK. But it’s tough, man. This game of football that we play, it’s got its highs and it’s got its lows — and this is one of the lows.”

Tagovailoa’s college years and first three NFL seasons were marred by injury, though he positioned himself for a big pay bump with an injury-free and productive 2023 as he led the Dolphins into the playoffs. He threw for 29 touchdowns and a league-best 4,624 yards last year.

When, or if, he can come back this season is anyone’s guess. Tagovailoa said in April 2023 that the concussions he had in the 2022 season left him contemplating his playing future. “I think I considered it for a time,” he said then, when asked if he considered stepping away from the game to protect himself.

McDaniel said it’s not his place to say if Tagovailoa should return to football. “He’ll be evaluated and we’ll have conversations and progress as appropriate,” McDaniel said.

Tagovailoa was hurt Thursday on a fourth-down keeper with about 4:30 left in the third. He went straight ahead into Hamlin and did not slide, leading with his right shoulder instead.

Hamlin was the player who suffered a cardiac arrest after making a tackle during a Monday night game in January 2023 at Cincinnati, causing the NFL to suspend a pivotal game that quickly lost significance in the aftermath of a scary scene that unfolded in front of a national television audience.

Tagovailoa wound up on his back, both his hands in the air and Bills players immediately pointed at him as if to suggest there was an injury. Dolphins center Aaron Brewer quickly did the same, waving to the sideline.

Tagovailoa appeared to be making a fist with his right hand as he lay on the ground. It was movement consistent with something that is referred to as the “fencing response,” which can be common after a traumatic brain injury.

Tagovailoa eventually got to his feet. McDaniel grabbed the side of his quarterback’s head and gave him a kiss on the cheek as Tagovailoa departed. Thompson came into the game to take Tagovailoa’s spot.

“I love Tua on and off the football field,” Bills edge Von Miller said. “I’m a huge fan of him. I can empathize and sympathize with him because I’ve been there. I wish him the best.”

Tagovailoa’s history with concussions — and how he has since worked to avoid them — is a huge part of the story of his career, and now comes to the forefront once again.

He had at least two concussions during the 2022 season. He was hurt in a Week 3 game against Buffalo and cleared concussion protocol, though he appeared disoriented on that play but returned to the game.

The NFL later changed its concussion protocol to mandate that if a player shows possible concussion symptoms — including a lack of balance or stability — he must sit out the rest of the game.

Less than a week later, in a Thursday night game at Cincinnati, Tagovailoa was concussed on a scary hit that briefly knocked him unconscious and led to him being taken off the field on a stretcher.

His second known concussion of that season came in a December game against Green Bay, and he didn’t play for the rest of the 2022 season. After that, Tagovailoa began studying ways where he may be able to fall more safely and protect himself against further injury — including studying jiu-jitsu.

“I’m not worried about anything that’s out of my hands,” McDaniel said. “I’m just worried about the human being.”

___

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Too much? Many Americans feel the need to limit their political news, AP-NORC/USAFacts poll finds

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NEW YORK (AP) — When her husband turns on the television to hear news about the upcoming presidential election, that’s often a signal for Lori Johnson Malveaux to leave the room.

It can get to be too much. Often, she’ll go to a TV in another room to watch a movie on the Hallmark Channel or BET. She craves something comforting and entertaining. And in that, she has company.

While about half of Americans say they are following political news “extremely” or “very” closely, about 6 in 10 say they need to limit how much information they consume about the government and politics to avoid feeling overloaded or fatigued, according to a new survey from the Associated Press-NORC Center for Public Affairs Research and USAFacts.

Make no mistake: Malveaux plans to vote. She always does. “I just get to the point where I don’t want to hear the rhetoric,” she said.

The 54-year-old Democrat said she’s most bothered when she hears people on the news telling her that something she saw with her own eyes — like the Jan. 6, 2021, attack on the U.S. Capitol — didn’t really happen.

“I feel like I’m being gaslit. That’s the way to put it,” she said.

Sometimes it feels like ‘a bombardment’

Caleb Pack, 23, a Republican from Ardmore, Oklahoma, who works in IT, tries to keep informed through the news feeds on his phone, which is stocked with a variety of sources, including CNN, Fox News, The Wall Street Journal and The Associated Press.

Yet sometimes, Pack says, it seems like a bombardment.

“It’s good to know what’s going on, but both sides are pulling a little bit extreme,” he said. “It just feels like it’s a conversation piece everywhere, and it’s hard to escape it.”

Media fatigue isn’t a new phenomenon. A Pew Research Center survey conducted in late 2019 found roughly two in three Americans felt worn out by the amount of news there is, about the same as in a poll taken in early 2018. During the 2016 presidential campaign, about 6 in 10 people felt overloaded by campaign news.

But it can be particularly acute with news related to politics. The AP-NORC/USAFacts poll found that half of Americans feel a need to limit their consumption of information related to crime or overseas conflicts, while only about 4 in 10 are limiting news about the economy and jobs.

It’s easy to understand, with television outlets like CNN, Fox News Channel and MSNBC full of political talk and a wide array of political news online, sometimes complicated by disinformation.

“There’s a glut of information,” said Richard Coffin, director of research and advocacy for USAFacts, “and people are having a hard time figuring out what is true or not.”

Women are more likely to feel they need to limit media

In the AP-NORC poll, about 6 in 10 men said they follow news about elections and politics at least “very” closely, compared to about half of women. For all types of news, not just politics, women are more likely than men to report the need to limit their media consumption, the survey found.

White adults are also more likely than Black or Hispanic adults to say they need to limit media consumption on politics, the poll found.

Kaleb Aravzo, 19, a Democrat, gets a baseline of news by listening to National Public Radio in the morning at home in Logan, Utah. Too much politics, particularly when he’s on social media sites like TikTok and Instagram, can trigger anxiety and depression.

“If it pops up on my page when I’m on social media,” he said, “I’ll just scroll past it.”

___

Sanders reported from Washington. David Bauder writes about media for the AP. Follow him at http://x.com/dbauder.

The AP poll of 1,019 adults was conducted July 29-August 8, 2024, using a sample drawn from NORC’s probability-based AmeriSpeak Panel, which is designed to be representative of the U.S. population. The margin of sampling error for all respondents is plus or minus 4.0 percentage points.

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