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Extreme species deficit of nitrogen-converting microbes in European lakes

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Sampling of Lake Constance water from 85 m depth, in which ammonia-oxidizing archaea make up as much as 40% of all microorganisms

Dr. David Kamanda Ngugi, environmental microbiologist at the Leibniz Institute DSMZ

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Leibniz Institute DSMZ

 

An international team of researchers led by microbiologists from the Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH in Braunschweig, Germany, shows that in the depths of European lakes, the detoxification of ammonium is ensured by an extremely low biodiversity of archaea. The researchers recently published their findings in the prestigious international journal Science Advances. The team led by environmental microbiologists from the Leibniz Institute DSMZ has now shown that the species diversity of these archaea in lakes around the world ranges from 1 to 15 species. This is of particularly concern in the context of global biodiversity loss and the UN Biodiversity Conference held in Montreal, Canada, in December 2022. Lakes play an important role in providing freshwater for drinking, inland fisheries, and recreation. These ecosystem services would be at danger from ammonium enrichment. Ammonium is an essential component of agricultural fertilizers and contributes to its remarkable increase in environmental concentrations and the overall im-balance of the global nitrogen cycle. Nutrient-poor lakes with large water masses (such as Lake Constance and many other pre-alpine lakes) harbor enormously large populations of archaea, a unique class of microorganisms. In sediments and other low-oxygen environments, these archaea convert ammonium to nitrate, which is then converted to inert dinitrogen gas, an essential component of the air. In this way, they contribute to the detoxification of ammonium in the aquatic environment. In fact, the species predominant in European lakes is even clonal and shows low genetic microdiversity between different lakes. This low species diversity contrasts with marine ecosystems where this group of microorganisms predominates with much greater species richness, making the stability of ecosystem function provided by these nitrogen-converting archaea potentially vulnerable to environmental change.

Maintenance of drinking water quality
Although there is a lot of water on our planet, only 2.5% of it is fresh water. Since much of this fresh water is stored in glaciers and polar ice caps, only about 80% of it is even accessible to us humans. About 36% of drinking water in the European Union is obtained from surface waters. It is therefore crucial to understand how environmental processes such as microbial nitrification maintain this ecosystem service. The rate-determining phase of nitrification is the oxidation of ammonia, which prevents the accumulation of ammonium and converts it to nitrate via nitrite. In this way, ammonium is prevented from contaminating water sources and is necessary for its final conversion to the harmless dinitrogen gas. In this study, deep lakes on five different continents were investigated to assess the richness and evolutionary history of ammonia-oxidizing archaea. Organisms from marine habitats have traditionally colonized freshwater ecosystems. However, these archaea have had to make significant changes in their cell composition, possible only a few times during evolution, when they moved from marine habitats to freshwaters with much lower salt concentrations. The researchers identified this selection pressure as the major barrier to greater diversity of ammonia-oxidizing archaea colonizing freshwaters. The researchers were also able to determine when the few freshwater archaea first appeared. Ac-cording to the study, the dominant archaeal species in European lakes emerged only about 13 million years ago, which is quite consistent with the evolutionary history of the European lakes studied.

Slowed evolution of freshwater archaea
The major freshwater species in Europe changed relatively little over the 13 million years and spread almost clonally across Europe and Asia, which puzzled the researchers. Currently, there are not many examples of such an evolutionary break over such long time periods and over large intercontinental ranges. The authors suggest that the main factor slowing the rapid growth rates and associated evolutionary changes is the low temperatures (4 °C) at the bottom of the lakes studied. As a result, these archaea are restricted to a state of low genetic diversity. It is unclear how the extremely species-poor and evolutionarily static freshwater archaea will respond to changes induced by global climate warming and eutrophication of nearby agricultur-al lands, as the effects of climate change are more pronounced in freshwater than in marine habitats, which is associated with a loss of biodiversity.

Publication: Ngugi DK, Salcher MM, Andre A-S, Ghai R., Klotz F, Chiriac M-C, Ionescu D, Büsing P, Grossart H-S, Xing P, Priscu JC, Alymkulov S, Pester M. 2022. Postglacial adaptations enabled coloniza-tion and quasi-clonal dispersal of ammonia oxidizing archaea in modern European large lakes. Science Advances: https://www.science.org/doi/10.1126/sciadv.adc9392

Press contact:
PhDr. Sven-David Müller, Head of Public Relations, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH
Phone: ++49 (0)531/2616-300
Mail: press@dsmz.de

About the Leibniz Institute DSMZ
The Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures is the world’s most diverse collection of biological resources (bacteria, archaea, protists, yeasts, fungi, bacteriophages, plant viruses, genomic bacterial DNA as well as human and animal cell lines). Microorganisms and cell cultures are collected, investigated and archived at the DSMZ. As an institution of the Leibniz Association, the DSMZ with its extensive scientific services and biological resources has been a global partner for research, science and industry since 1969. The DSMZ was the first registered collection in Europe (Regulation (EU) No. 511/2014) and is certified according to the quality standard ISO 9001:2015. As a patent depository, it offers the only possibility in Germany to deposit biological material in accordance with the requirements of the Budapest Treaty. In addition to scientific services, research is the second pillar of the DSMZ. The institute, located on the Science Campus Braunschweig-Süd, accommodates more than 82,000 cultures and biomaterials and has around 200 employees. www.dsmz.de

PhDr. Sven David Mueller, M.Sc.
Leibniz-Institut DSMZ
+49 531 2616300
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Marine plankton could act as alert in mass extinction event: UVic researcher – Langley Advance Times

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A University of Victoria micropaleontologist found that marine plankton may act as an early alert system before a mass extinction occurs.

With help from collaborators at the University of Bristol and Harvard, Andy Fraass’ newest paper in the Nature journal shows that after an analysis of fossil records showed that plankton community structures change before a mass extinction event.

“One of the major findings of the paper was how communities respond to climate events in the past depends on the previous climate,” Fraass said in a news release. “That means that we need to spend a lot more effort understanding recent communities, prior to industrialization. We need to work out what community structure looked like before human-caused climate change, and what has happened since, to do a better job at predicting what will happen in the future.”

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According to the release, the fossil record is the most complete and extensive archive of biological changes available to science and by applying advanced computational analyses to the archive, researchers were able to detail the global community structure of the oceans dating back millions of years.

A key finding of the study was that during the “early eocene climatic optimum,” a geological era with sustained high global temperatures equivalent to today’s worst case global warming scenarios, marine plankton communities moved to higher latitudes and only the most specialized plankton remained near the equator, suggesting that the tropical temperatures prevented higher amounts of biodiversity.

“Considering that three billion people live in the tropics, the lack of biodiversity at higher temperatures is not great news,” paper co-leader Adam Woodhouse said in the release.

Next, the team plans to apply similar research methods to other marine plankton groups.

Read More: Global study, UVic researcher analyze how mammals responded during pandemic

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Scientists Say They Have Found New Evidence Of An Unknown Planet… – 2oceansvibe News

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In the new work, scientists looked at a set of trans-Neptunian objects, or TNOs, which is the technical term for those objects that sit out at the edge of the solar system, beyond Neptune

The new work looked at those objects that have their movement made unstable because they interact with the orbit of Neptune. That instability meant they were harder to understand, so typically astronomers looking at a possible Planet Nine have avoided using them in their analysis.

Researchers instead looked towards those objects and tried to understand their movements. And, Dr Bogytin claimed, the best explanation is that they result from another, undiscovered planet.

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The team carried out a host of simulations to understand how those objects’ orbits were affected by a variety of things, including the giant planets around them such as Neptune, the “Galactic tide” that comes from the Milky Way, and passing stars.

The best explanation was from the model that included Planet 9, however, Dr Bogytin said. They noted that there were other explanations for the behaviour of those objects – including the suggestion that other planets once influenced their orbit, but have since been removed – but claim that the theory of Planet 9 remains the best explanation.

A better understanding of the existence or not of Planet 9 will come when the Vera C Rubin Observatory is turned on, the authors note. The observatory is currently being built in Chile, and when it is turned on it will be able to scan the sky to understand the behaviour of those distant objects.

Planet Nine is theorised to have a mass about 10 times that of Earth and orbit about 20 times farther from the Sun on average than Neptune. It may take between 10,000 and 20,000 Earth years to make one full orbit around the Sun.

You may be tempted to ask how an entire planet could ‘hide’ in our solar system when we have zooming capabilities such as the new iPhone 15 has, but consider this: If Earth was the size of a marble, the edge of our solar system would be 11 kilometres away. That’s a lot of space to hide a planet.

[source:independent]

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Dragonfly: NASA Just Confirmed The Most Exciting Space Mission Of Your Lifetime – Forbes

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NASA has confirmed that its exciting Dragonfly mission, which will fly a drone-like craft around Saturn’s largest moon, Titan, will cost $3.35 billion and launch in July 2028.

Titan is the only other world in the solar system other than Earth that has weather and liquid on the surface. It has an atmosphere, rain, lakes, oceans, shorelines, valleys, mountain ridges, mesas and dunes—and possibly the building blocks of life itself. It’s been described as both a utopia and as deranged because of its weird chemistry.

Set to reach Titan in 2034, the Dragonfly mission will last for two years once its lander arrives on the surface. During the mission, a rotorcraft will fly to a new location every Titan day (16 Earth days) to take samples of the giant moon’s prebiotic chemistry. Here’s what else it will do:

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  • Search for chemical biosignatures, past or present, from water-based life to that which might use liquid hydrocarbons.
  • Investigate the moon’s active methane cycle.
  • Explore the prebiotic chemistry in the atmosphere and on the surface.

Spectacular Mission

“Dragonfly is a spectacular science mission with broad community interest, and we are excited to take the next steps on this mission,” said Nicky Fox, associate administrator of the Science Mission Directorate at NASA Headquarters in Washington. “Exploring Titan will push the boundaries of what we can do with rotorcraft outside of Earth.”

It comes in the wake of the Mars Helicopter, nicknamed Ingenuity, which flew 72 times between April 2021 and its final flight in January 2023 despite only being expected to make up to five experimental test flights over 30 days. It just made its final downlink of data this week.

Dense Atmosphere

However, Titan is a completely different environment to Mars. Titan has a dense atmosphere on Titan, which will make buoyancy simple. Gravity on Titan is just 14% of the Earth’s. It sees just 1% of the sunlight received by Earth.

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The atmosphere is 98% nitrogen and 2% methane. Its seas and lakes are not water but liquid ethane and methane. The latter is gas in Titan’s atmosphere, but on its surface, it exists as a liquid in rain, snow, lakes, and ice on its surface.

COVID-Affected

Dragonfly was a victim of the pandemic. Slated to cost $1 billion when it was selected in 2019, it was meant to launch in 2026 and arrive in 2034 after an eight-year cruise phase. However, after delays due to COVID, NASA decided to compensate for the inevitable delayed launch by funding a heavy-lift launch vehicle to massively shorten the mission’s cruise phase.

The end result is that Dragonfly will take off two years later but arrive on schedule.

Previous Visit

Dragonfly won’t be the first time a robotic probe has visited Titan. As part of NASA’s landmark Cassini mission to Saturn between 2004 and 2017, a small probe called Huygens was despatched into Titan’s clouds on January 14, 2005. The resulting timelapse movie of its 2.5 hours descent—which heralded humanity’s first-ever (and only) views of Titan’s surface—is a must-see for space fans. It landed in an area of rounded blocks of ice, but on the way down, it saw ancient dry shorelines reminiscent of Earth as well as rivers of methane.

The announcement by NASA makes July 2028 a month worth circling for space fans, with a long-duration total solar eclipse set for July 22, 2028, in Australia and New Zealand.

Wishing you clear skies and wide eyes.

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